HL_5J91_201

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

5J91|1|DA|U|2797, 5J91|1|DA|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J91_201 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.0621

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

5J91|1|DA|C|2795
5J91|1|DA|U|2796
5J91|1|DA|U|2797
5J91|1|DA|U|2798
5J91|1|DA|A|2799
5J91|1|DA|A|2800
5J91|1|DA|G|2801

Current chains

Chain DA

23S rRNA

Nearby chains