HL_5J91_211

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

5J91|1|CA|U|1729, 5J91|1|CA|C|1732

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J91_211 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.1174

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

5J91|1|CA|C|1727
5J91|1|CA|C|1728
5J91|1|CA|U|1729
5J91|1|CA|C|1730
5J91|1|CA|G|1731
5J91|1|CA|C|1732
5J91|1|CA|G|1733

Current chains

Chain CA

23S rRNA

Nearby chains