HL_5JC9_049
3D structure
- PDB id
- 5JC9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.03 Å
Loop
- Sequence
- CCUUGAG
- Length
- 7 nucleotides
- Bulged bases
- 5JC9|1|BA|U|843
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5JC9_049 not in the Motif Atlas
- Geometric match to HL_8C3A_221
- Geometric discrepancy: 0.2609
- The information below is about HL_8C3A_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 23
Unit IDs
5JC9|1|BA|C|840
5JC9|1|BA|C|841
5JC9|1|BA|U|842
5JC9|1|BA|U|843
5JC9|1|BA|G|844
5JC9|1|BA|A|845
5JC9|1|BA|G|846
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BR
- 30S ribosomal protein S18
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