HL_5JTE_050

3D structure

PDB id

5JTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

5JTE|1|BA|U|321, 5JTE|1|BA|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5JTE_050 not in the Motif Atlas

Homologous match to HL_5J7L_143

Geometric discrepancy: 0.1291

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

5JTE|1|BA|G|319
5JTE|1|BA|A|320
5JTE|1|BA|U|321
5JTE|1|BA|A|322
5JTE|1|BA|C|323

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BU

50S ribosomal protein L24