HL_5JTE_113
3D structure
- PDB id
- 5JTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACU(U8U)UU(T6A)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5JTE_113 not in the Motif Atlas
- Homologous match to HL_5E81_235
- Geometric discrepancy: 0.1658
- The information below is about HL_5E81_235
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 42
Unit IDs
5JTE|1|AW|A|31
5JTE|1|AW|C|32
5JTE|1|AW|U|33
5JTE|1|AW|U8U|34
5JTE|1|AW|U|35
5JTE|1|AW|U|36
5JTE|1|AW|T6A|37
5JTE|1|AW|A|38
5JTE|1|AW|PSU|39
Current chains
- Chain AW
- A-site Lysine tRNA Lysine
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AL
- 30S ribosomal protein S12
- Chain AV
- mRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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