HL_5K36_001
3D structure
- PDB id
- 5K36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an eleven component nuclear RNA exosome complex bound to RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUAUUUAUUU
- Length
- 11 nucleotides
- Bulged bases (A, C, G, U)
- 3U, 8U, 10U
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_98252.1
- Basepair signature
- cWW-tWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
5K36|1|L|A|2
5K36|1|L|U|3
5K36|1|L|U|4
5K36|1|L|A|5
5K36|1|L|U|6
5K36|1|L|U|7
5K36|1|L|U|8
5K36|1|L|A|9
5K36|1|L|U|10
5K36|1|L|U|11
5K36|1|L|U|12
Current chains
- Chain L
- RNA (17-MER)
Nearby chains
- Chain B
- Exosome complex component SKI6
- Chain D
- Exosome complex component RRP46
- Chain F
- Exosome complex component MTR3
- Chain G
- Exosome complex component RRP40
- Chain H
- Exosome complex component RRP4
- Chain I
- Exosome complex component CSL4
- Chain J
- Exosome complex exonuclease RRP6
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