3D structure

PDB id
5KCS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GGCGACGGUUGUCC
Length
14 nucleotides
Bulged bases
5KCS|1|1A|A|1453, 5KCS|1|1A|C|1454, 5KCS|1|1A|U|1460
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5KCS|1|1A|G|1449
5KCS|1|1A|G|1450
5KCS|1|1A|C|1451
5KCS|1|1A|G|1452
5KCS|1|1A|A|1453
5KCS|1|1A|C|1454
5KCS|1|1A|G|1455
5KCS|1|1A|G|1456
5KCS|1|1A|U|1457
5KCS|1|1A|U|1458
5KCS|1|1A|G|1459
5KCS|1|1A|U|1460
5KCS|1|1A|C|1461
5KCS|1|1A|C|1462

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1R
50S ribosomal protein L17

Coloring options:

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