HL_5KPV_113

3D structure

PDB id

5KPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

5KPV|1|27|U|1173, 5KPV|1|27|A|1175, 5KPV|1|27|G|1179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPV|1|27|G|1168
5KPV|1|27|A|1169
5KPV|1|27|C|1170
5KPV|1|27|G|1171
5KPV|1|27|C|1172
5KPV|1|27|U|1173
5KPV|1|27|U|1174
5KPV|1|27|A|1175
5KPV|1|27|U|1176
5KPV|1|27|G|1177
5KPV|1|27|C|1178
5KPV|1|27|G|1179
5KPV|1|27|U|1180
5KPV|1|27|U|1181

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L21