HL_5KPW_029
3D structure
- PDB id
- 5KPW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 5KPW|1|26|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5KPW_029 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1494
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5KPW|1|26|G|1356
5KPW|1|26|A|1357
5KPW|1|26|U|1358
5KPW|1|26|C|1359
5KPW|1|26|A|1360
5KPW|1|26|G|1361
5KPW|1|26|A|1362
5KPW|1|26|A|1363
5KPW|1|26|U|1364
5KPW|1|26|G|1365
5KPW|1|26|C|1366
Current chains
- Chain 26
- 16S ribosomal RNA
Nearby chains
- Chain 13
- 30S ribosomal protein S9
- Chain 14
- 30S ribosomal protein S10
- Chain 18
- 30S ribosomal protein S14
- Chain 7
- 30S ribosomal protein S3
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