HL_5KPW_081

3D structure

PDB id

5KPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGGACGCCAGUCUGC

Length

16 nucleotides

Bulged bases

5KPW|1|27|C|2145, 5KPW|1|27|C|2146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPW|1|27|G|2138
5KPW|1|27|U|2139
5KPW|1|27|G|2140
5KPW|1|27|G|2141
5KPW|1|27|A|2142
5KPW|1|27|C|2143
5KPW|1|27|G|2144
5KPW|1|27|C|2145
5KPW|1|27|C|2146
5KPW|1|27|A|2147
5KPW|1|27|G|2148
5KPW|1|27|U|2149
5KPW|1|27|C|2150
5KPW|1|27|U|2151
5KPW|1|27|G|2152
5KPW|1|27|C|2153

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 15

30S ribosomal protein S11