HL_5LI0_109

3D structure

PDB id

5LI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAAGAACAUAUGUGUAAGUAACUGUGCACAUCUUGACGGUAC

Length

43 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LI0|1|a|G|454
5LI0|1|a|G|455
5LI0|1|a|A|456
5LI0|1|a|A|457
5LI0|1|a|G|458
5LI0|1|a|A|459
5LI0|1|a|A|460
5LI0|1|a|C|461
5LI0|1|a|A|462
5LI0|1|a|U|463
5LI0|1|a|A|464
5LI0|1|a|U|465
5LI0|1|a|G|466
5LI0|1|a|U|467
5LI0|1|a|G|468
5LI0|1|a|U|469
5LI0|1|a|A|470
5LI0|1|a|A|471
5LI0|1|a|G|472
5LI0|1|a|U|473
5LI0|1|a|A|474
5LI0|1|a|A|475
5LI0|1|a|C|476
5LI0|1|a|U|477
5LI0|1|a|G|478
5LI0|1|a|U|479
5LI0|1|a|G|480
5LI0|1|a|C|481
5LI0|1|a|A|482
5LI0|1|a|C|483
5LI0|1|a|A|484
5LI0|1|a|U|485
5LI0|1|a|C|486
5LI0|1|a|U|487
5LI0|1|a|U|488
5LI0|1|a|G|489
5LI0|1|a|A|490
5LI0|1|a|C|491
5LI0|1|a|G|492
5LI0|1|a|G|493
5LI0|1|a|U|494
5LI0|1|a|A|495
5LI0|1|a|C|496

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16