HL_5LL6_016

3D structure

PDB id

5LL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGCCGGUCGGAUUUCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LL6|1|2|G|651
5LL6|1|2|G|652
5LL6|1|2|C|653
5LL6|1|2|C|654
5LL6|1|2|G|655
5LL6|1|2|G|656
5LL6|1|2|U|657
5LL6|1|2|C|658
5LL6|1|2|G|676
5LL6|1|2|G|677
5LL6|1|2|A|678
5LL6|1|2|U|679
5LL6|1|2|U|680
5LL6|1|2|U|681
5LL6|1|2|C|682
5LL6|1|2|C|683

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain W

40S ribosomal protein S9-A