HL_5LL6_020

3D structure

PDB id

5LL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUCUAUUUUGUUGGUUUCUAGGA

Length

23 nucleotides

Bulged bases

5LL6|1|2|U|830

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LL6|1|2|U|825
5LL6|1|2|U|826
5LL6|1|2|C|827
5LL6|1|2|U|828
5LL6|1|2|A|829
5LL6|1|2|U|830
5LL6|1|2|U|831
5LL6|1|2|U|832
5LL6|1|2|U|833
5LL6|1|2|G|834
5LL6|1|2|U|835
5LL6|1|2|U|836
5LL6|1|2|G|837
5LL6|1|2|G|838
5LL6|1|2|U|839
5LL6|1|2|U|840
5LL6|1|2|U|841
5LL6|1|2|C|842
5LL6|1|2|U|843
5LL6|1|2|A|844
5LL6|1|2|G|845
5LL6|1|2|G|846
5LL6|1|2|A|847

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain X

40S ribosomal protein S11-A