HL_5LL6_028

3D structure

PDB id

5LL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUAGAGAUCUCAGA

Length

14 nucleotides

Bulged bases

5LL6|1|2|A|1693, 5LL6|1|2|U|1708

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LL6|1|2|U|1687
5LL6|1|2|U|1688
5LL6|1|2|A|1689
5LL6|1|2|G|1690
5LL6|1|2|A|1691
5LL6|1|2|G|1692
5LL6|1|2|A|1693
5LL6|1|2|U|1708
5LL6|1|2|C|1709
5LL6|1|2|U|1710
5LL6|1|2|C|1711
5LL6|1|2|A|1712
5LL6|1|2|G|1713
5LL6|1|2|A|1714

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain T

40S ribosomal protein S6-A