HL_5LMP_005

3D structure

PDB id

5LMP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1C)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.35 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

5LMP|1|A|U|202

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LMP_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.3768

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

5LMP|1|A|C|201
5LMP|1|A|U|202
5LMP|1|A|U|203
5LMP|1|A|U|204
5LMP|1|A|G|216

Current chains

Chain A

16S rRNA

Nearby chains