HL_5LMT_005

3D structure

PDB id

5LMT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.15 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

5LMT|1|A|U|202

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LMT_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.4079

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

5LMT|1|A|C|201
5LMT|1|A|U|202
5LMT|1|A|U|203
5LMT|1|A|U|204
5LMT|1|A|G|216

Current chains

Chain A

16S ribosomal RNA

Nearby chains