HL_5LMU_005

3D structure

PDB id

5LMU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

5LMU|1|A|U|202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LMU_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.4479

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

5LMU|1|A|C|201
5LMU|1|A|U|202
5LMU|1|A|U|203
5LMU|1|A|U|204
5LMU|1|A|G|216

Current chains

Chain A

16S ribosomal RNA

Nearby chains