HL_5LYB_136
3D structure
- PDB id
- 5LYB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- CGAAAUG
- Length
- 7 nucleotides
- Bulged bases
- 5LYB|1|5|A|1025, 5LYB|1|5|U|1028
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LYB|1|5|C|1023
5LYB|1|5|G|1024
5LYB|1|5|A|1025
5LYB|1|5|A|1026
5LYB|1|5|A|1027
5LYB|1|5|U|1028
5LYB|1|5|G|1029
Current chains
- Chain 5
- 25S rRNA
Nearby chains
- Chain e1
- Ubiquitin-40S ribosomal protein S31
- Chain m1
- 60S ribosomal protein L11-B
- Chain sM
- Suppressor protein STM1,Suppressor protein STM1,Ribosome-bound protein Stm1
Coloring options: