HL_5LZA_028

3D structure

PDB id

5LZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

5LZA|1|A|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZA|1|A|G|1168
5LZA|1|A|A|1169
5LZA|1|A|C|1170
5LZA|1|A|G|1171
5LZA|1|A|C|1172
5LZA|1|A|U|1173
5LZA|1|A|U|1174
5LZA|1|A|A|1175
5LZA|1|A|U|1176
5LZA|1|A|G|1177
5LZA|1|A|C|1178
5LZA|1|A|G|1179
5LZA|1|A|U|1180
5LZA|1|A|U|1181

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15