HL_5LZA_099
3D structure
- PDB id
- 5LZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 5LZA|1|a|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZA_099 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.0962
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5LZA|1|a|G|1356
5LZA|1|a|A|1357
5LZA|1|a|U|1358
5LZA|1|a|C|1359
5LZA|1|a|A|1360
5LZA|1|a|G|1361
5LZA|1|a|A|1362
5LZA|1|a|A|1363
5LZA|1|a|U|1364
5LZA|1|a|G|1365
5LZA|1|a|C|1366
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: