HL_5LZC_062
3D structure
- PDB id
- 5LZC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZC_062 not in the Motif Atlas
- Homologous match to HL_7A0S_063
- Geometric discrepancy: 0.1488
- The information below is about HL_7A0S_063
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
5LZC|1|A|C|2658
5LZC|1|A|G|2659
5LZC|1|A|A|2660
5LZC|1|A|G|2661
5LZC|1|A|A|2662
5LZC|1|A|G|2663
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain y
- Selenocysteine transfer RNA
- Chain z
- Selenocysteine-specific elongation factor
Coloring options: