HL_5LZD_078
3D structure
- PDB id
- 5LZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUACGG
- Length
- 6 nucleotides
- Bulged bases
- 5LZD|1|a|A|344
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZD_078 not in the Motif Atlas
- Homologous match to HL_4LFB_009
- Geometric discrepancy: 0.2151
- The information below is about HL_4LFB_009
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
5LZD|1|a|C|342
5LZD|1|a|U|343
5LZD|1|a|A|344
5LZD|1|a|C|345
5LZD|1|a|G|346
5LZD|1|a|G|347
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
Coloring options: