HL_5LZS_001
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GUAGCGGUUAUC
- Length
- 12 nucleotides
- Bulged bases
- 5LZS|1|2|C|16, 5LZS|1|2|G|18, 5LZS|1|2|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZS_001 not in the Motif Atlas
- Homologous match to HL_1SER_001
- Geometric discrepancy: 0.3668
- The information below is about HL_1SER_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40252.3
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
5LZS|1|2|G|12
5LZS|1|2|U|13
5LZS|1|2|A|14
5LZS|1|2|G|15
5LZS|1|2|C|16
5LZS|1|2|G|18
5LZS|1|2|G|19
5LZS|1|2|U|20
5LZS|1|2|U|20|||A
5LZS|1|2|A|21
5LZS|1|2|U|22
5LZS|1|2|C|23
Current chains
- Chain 2
- tRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- uL5
- Chain o
- eL42
Coloring options: