3D structure

PDB id
5LZS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.31 Å

Loop

Sequence
GUGGCCAUGGAAGUCGGAAUC
Length
21 nucleotides
Bulged bases
5LZS|1|5|U|1974
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZS|1|5|G|1973
5LZS|1|5|U|1974
5LZS|1|5|G|1975
5LZS|1|5|G|1976
5LZS|1|5|C|1977
5LZS|1|5|C|1978
5LZS|1|5|A|1979
5LZS|1|5|U|1980
5LZS|1|5|G|1981
5LZS|1|5|G|1982
5LZS|1|5|A|1983
5LZS|1|5|A|1984
5LZS|1|5|G|1985
5LZS|1|5|U|1986
5LZS|1|5|C|1987
5LZS|1|5|G|1988
5LZS|1|5|G|1989
5LZS|1|5|A|1990
5LZS|1|5|A|1991
5LZS|1|5|U|1992
5LZS|1|5|C|1993

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain I
Ribosomal protein L10 (Predicted)
Chain ii
Transfer RNA; tRNA
Chain s
uL10
Chain t
uL11

Coloring options:

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