HL_5LZT_034

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

5LZT|1|5|U|1974

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|5|G|1973
5LZT|1|5|U|1974
5LZT|1|5|G|1975
5LZT|1|5|G|1976
5LZT|1|5|C|1977
5LZT|1|5|C|1978
5LZT|1|5|A|1979
5LZT|1|5|U|1980
5LZT|1|5|G|1981
5LZT|1|5|G|1982
5LZT|1|5|A|1983
5LZT|1|5|A|1984
5LZT|1|5|G|1985
5LZT|1|5|U|1986
5LZT|1|5|C|1987
5LZT|1|5|G|1988
5LZT|1|5|G|1989
5LZT|1|5|A|1990
5LZT|1|5|A|1991
5LZT|1|5|U|1992
5LZT|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

uL16

Chain ii

eRF1

Chain s

uL10

Chain t

uL11