HL_5LZT_109

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GAUUGAUAGCUC

Length

12 nucleotides

Bulged bases

5LZT|1|9|U|1300, 5LZT|1|9|G|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|9|G|1294
5LZT|1|9|A|1295
5LZT|1|9|U|1296
5LZT|1|9|U|1297
5LZT|1|9|G|1298
5LZT|1|9|A|1299
5LZT|1|9|U|1300
5LZT|1|9|A|1301
5LZT|1|9|G|1302
5LZT|1|9|C|1303
5LZT|1|9|U|1304
5LZT|1|9|C|1305

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain PP

uS19

Chain dd

uS14

Chain ff

eS31

Chain ii

eRF1