HL_5LZU_001
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GUAGCGGUUAUC
- Length
- 12 nucleotides
- Bulged bases
- 5LZU|1|2|C|16, 5LZU|1|2|G|18, 5LZU|1|2|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZU_001 not in the Motif Atlas
- Homologous match to HL_1SER_001
- Geometric discrepancy: 0.3483
- The information below is about HL_1SER_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40252.3
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
5LZU|1|2|G|12
5LZU|1|2|U|13
5LZU|1|2|A|14
5LZU|1|2|G|15
5LZU|1|2|C|16
5LZU|1|2|G|18
5LZU|1|2|G|19
5LZU|1|2|U|20
5LZU|1|2|U|20|||A
5LZU|1|2|A|21
5LZU|1|2|U|22
5LZU|1|2|C|23
Current chains
- Chain 2
- P-site tRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- uL5
- Chain o
- eL42
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