HL_5LZV_034

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|5|G|1973
5LZV|1|5|U|1974
5LZV|1|5|G|1975
5LZV|1|5|G|1976
5LZV|1|5|C|1977
5LZV|1|5|C|1978
5LZV|1|5|A|1979
5LZV|1|5|U|1980
5LZV|1|5|G|1981
5LZV|1|5|G|1982
5LZV|1|5|A|1983
5LZV|1|5|A|1984
5LZV|1|5|G|1985
5LZV|1|5|U|1986
5LZV|1|5|C|1987
5LZV|1|5|G|1988
5LZV|1|5|G|1989
5LZV|1|5|A|1990
5LZV|1|5|A|1991
5LZV|1|5|U|1992
5LZV|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

uL16

Chain ii

eRF1(AAQ)

Chain s

uL10

Chain t

uL11