HL_5LZW_035

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

5LZW|1|5|U|1974

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|G|1973
5LZW|1|5|U|1974
5LZW|1|5|G|1975
5LZW|1|5|G|1976
5LZW|1|5|C|1977
5LZW|1|5|C|1978
5LZW|1|5|A|1979
5LZW|1|5|U|1980
5LZW|1|5|G|1981
5LZW|1|5|G|1982
5LZW|1|5|A|1983
5LZW|1|5|A|1984
5LZW|1|5|G|1985
5LZW|1|5|U|1986
5LZW|1|5|C|1987
5LZW|1|5|G|1988
5LZW|1|5|G|1989
5LZW|1|5|A|1990
5LZW|1|5|A|1991
5LZW|1|5|U|1992
5LZW|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

uL16

Chain ii

Pelota

Chain s

uL10

Chain t

uL11