HL_5LZX_117
3D structure
- PDB id
- 5LZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- GUCAUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 5LZX|1|9|G|1665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZX_117 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.2958
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5LZX|1|9|G|1658
5LZX|1|9|U|1659
5LZX|1|9|C|1660
5LZX|1|9|A|1661
5LZX|1|9|U|1662
5LZX|1|9|A|1663
5LZX|1|9|A|1664
5LZX|1|9|G|1665
5LZX|1|9|C|1666
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain QQ
- uS9
- Chain TT
- eS19
- Chain UU
- uS10
- Chain dd
- uS14
Coloring options: