HL_5LZX_124

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

AGAGACGUUUUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|5|A|3943
5LZX|1|5|G|3944
5LZX|1|5|A|3945
5LZX|1|5|G|3946
5LZX|1|5|A|3947
5LZX|1|5|C|3948
5LZX|1|5|G|4065
5LZX|1|5|U|4066
5LZX|1|5|U|4067
5LZX|1|5|U|4068
5LZX|1|5|U|4069
5LZX|1|5|U|4070

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain BB

40S ribosomal protein S3a

Chain i

60S ribosomal protein L36