HL_5LZX_128

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

ACAGAUUGAUAGCUCUU

Length

17 nucleotides

Bulged bases

5LZX|1|9|U|1300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|9|A|1291
5LZX|1|9|C|1292
5LZX|1|9|A|1293
5LZX|1|9|G|1294
5LZX|1|9|A|1295
5LZX|1|9|U|1296
5LZX|1|9|U|1297
5LZX|1|9|G|1298
5LZX|1|9|A|1299
5LZX|1|9|U|1300
5LZX|1|9|A|1301
5LZX|1|9|G|1302
5LZX|1|9|C|1303
5LZX|1|9|U|1304
5LZX|1|9|C|1305
5LZX|1|9|U|1306
5LZX|1|9|U|1307

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain PP

uS19

Chain dd

uS14

Chain ff

eS31