HL_5LZZ_035

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

5LZZ|1|5|U|1974

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|5|G|1973
5LZZ|1|5|U|1974
5LZZ|1|5|G|1975
5LZZ|1|5|G|1976
5LZZ|1|5|C|1977
5LZZ|1|5|C|1978
5LZZ|1|5|A|1979
5LZZ|1|5|U|1980
5LZZ|1|5|G|1981
5LZZ|1|5|G|1982
5LZZ|1|5|A|1983
5LZZ|1|5|A|1984
5LZZ|1|5|G|1985
5LZZ|1|5|U|1986
5LZZ|1|5|C|1987
5LZZ|1|5|G|1988
5LZZ|1|5|G|1989
5LZZ|1|5|A|1990
5LZZ|1|5|A|1991
5LZZ|1|5|U|1992
5LZZ|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein L10 (Predicted)

Chain ii

Protein pelota homolog

Chain s

uL10

Chain t

uL11