HL_5LZZ_091

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

5LZZ|1|9|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LZZ_091 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3805

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27483.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

5LZZ|1|9|G|377
5LZZ|1|9|U|378
5LZZ|1|9|C|379
5LZZ|1|9|G|380
5LZZ|1|9|C|381
5LZZ|1|9|C|382
5LZZ|1|9|G|383
5LZZ|1|9|U|384
5LZZ|1|9|G|385
5LZZ|1|9|C|386
5LZZ|1|9|C|387

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain II

40S ribosomal protein S8

Chain LL

uS17