HL_5M0J_002
3D structure
- PDB id
- 5M0J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the cytoplasmic complex with She2p, She3p, and the ASH1 mRNA E3-localization element
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
5M0J|1|F|C|12
5M0J|1|F|G|13
5M0J|1|F|A|14
5M0J|1|F|A|15
5M0J|1|F|A|16
5M0J|1|F|G|17
Current chains
- Chain F
- ASH1 E3 (28 nt-loop)
Nearby chains
- Chain C
- SWI5-dependent HO expression protein 2,SWI5-dependent HO expression protein 3
Coloring options: