HL_5MDW_028

3D structure

PDB id

5MDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

UUAGAAGCA

Length

9 nucleotides

Bulged bases

5MDW|1|1|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MDW|1|1|U|1065
5MDW|1|1|U|1066
5MDW|1|1|A|1067
5MDW|1|1|G|1068
5MDW|1|1|A|1069
5MDW|1|1|A|1070
5MDW|1|1|G|1071
5MDW|1|1|C|1072
5MDW|1|1|A|1073

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 7

Peptide chain release factor 2

Chain I

50S ribosomal protein L11