HL_5MDW_110

3D structure

PDB id

5MDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

5MDW|1|2|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MDW|1|2|G|203
5MDW|1|2|G|204
5MDW|1|2|A|205
5MDW|1|2|C|206
5MDW|1|2|C|207
5MDW|1|2|U|208
5MDW|1|2|U|209
5MDW|1|2|C|210
5MDW|1|2|G|211
5MDW|1|2|G|212
5MDW|1|2|G|213
5MDW|1|2|C|214

Current chains

Chain 2

16S ribosomal RNA

Nearby chains