HL_5MRC_015

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

GGAUAAAC

Length

8 nucleotides

Bulged bases

5MRC|1|A|A|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRC_015 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1112

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5MRC|1|A|G|612
5MRC|1|A|G|613
5MRC|1|A|A|614
5MRC|1|A|U|615
5MRC|1|A|A|616
5MRC|1|A|A|617
5MRC|1|A|A|618
5MRC|1|A|C|619

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

uL2m

Chain OO

uS15m