HL_5MRE_011
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- AUUAUAUU
- Length
- 8 nucleotides
- Bulged bases
- 5MRE|1|A|U|442, 5MRE|1|A|U|443, 5MRE|1|A|U|447
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MRE_011 not in the Motif Atlas
- Homologous match to HL_7A0S_017
- Geometric discrepancy: 0.3101
- The information below is about HL_7A0S_017
- Detailed Annotation
- Mini UNCG with extended bulge
- Broad Annotation
- Mini UNCG with extended bulge
- Motif group
- HL_90436.3
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
5MRE|1|A|A|441
5MRE|1|A|U|442
5MRE|1|A|U|443
5MRE|1|A|A|444
5MRE|1|A|U|445
5MRE|1|A|A|446
5MRE|1|A|U|447
5MRE|1|A|U|448
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 4
- mL43
- Chain 5
- mL44
- Chain H
- uL13m
- Chain N
- bL21m
- Chain O
- uL22m
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