HL_5MRE_012
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UUUUGUAUAA
- Length
- 10 nucleotides
- Bulged bases
- 5MRE|1|A|A|473
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MRE_012 not in the Motif Atlas
- Geometric match to HL_5J7L_150
- Geometric discrepancy: 0.0879
- The information below is about HL_5J7L_150
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5MRE|1|A|U|465
5MRE|1|A|U|466
5MRE|1|A|U|467
5MRE|1|A|U|468
5MRE|1|A|G|469
5MRE|1|A|U|470
5MRE|1|A|A|471
5MRE|1|A|U|472
5MRE|1|A|A|473
5MRE|1|A|A|474
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- uL3m
- Chain J
- uL15m
- Chain N
- bL21m
- Chain W
- bL32m
Coloring options: