HL_5MRE_024

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

AUAAU

Length

5 nucleotides

Bulged bases

5MRE|1|A|U|1205, 5MRE|1|A|A|1207

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_024 not in the Motif Atlas

Geometric match to HL_4OOG_001

Geometric discrepancy: 0.1436

The information below is about HL_4OOG_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

5MRE|1|A|A|1195
5MRE|1|A|U|1205
5MRE|1|A|A|1206
5MRE|1|A|A|1207
5MRE|1|A|U|1208

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 4

mL43

Chain 7

mL49