HL_5MRE_032
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GUUAGUC
- Length
- 7 nucleotides
- Bulged bases
- 5MRE|1|A|U|1645, 5MRE|1|A|U|1648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MRE_032 not in the Motif Atlas
- Geometric match to HL_6JQ6_004
- Geometric discrepancy: 0.2394
- The information below is about HL_6JQ6_004
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_61337.3
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 62
Unit IDs
5MRE|1|A|G|1643
5MRE|1|A|U|1644
5MRE|1|A|U|1645
5MRE|1|A|A|1646
5MRE|1|A|G|1647
5MRE|1|A|U|1648
5MRE|1|A|C|1649
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 11
- mS38
- Chain B
- uL2m
- Chain OO
- uS15m
- Chain aa
- Small subunit ribosomal RNA; SSU rRNA
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