HL_5MRE_038
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 5MRE|1|A|A|1930, 5MRE|1|A|A|1931, 5MRE|1|A|G|1932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MRE_038 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1251
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
5MRE|1|A|G|1927
5MRE|1|A|U|1928
5MRE|1|A|G|1929
5MRE|1|A|A|1930
5MRE|1|A|A|1931
5MRE|1|A|G|1932
5MRE|1|A|A|1933
5MRE|1|A|U|1934
5MRE|1|A|G|1935
5MRE|1|A|C|1936
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- uL3m
- Chain N
- bL21m
- Chain W
- bL32m
- Chain c
- mL60
Coloring options: