HL_5MRE_043

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

AAAAUU

Length

6 nucleotides

Bulged bases

5MRE|1|A|A|2330, 5MRE|1|A|U|2331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_043 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1387

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5MRE|1|A|A|2327
5MRE|1|A|A|2328
5MRE|1|A|A|2329
5MRE|1|A|A|2330
5MRE|1|A|U|2331
5MRE|1|A|U|2332

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 1

mL38

Chain R

bL27m