HL_5MRE_044

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UAUUAUA

Length

7 nucleotides

Bulged bases

5MRE|1|A|U|2360, 5MRE|1|A|U|2362

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_044 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.307

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

5MRE|1|A|U|2357
5MRE|1|A|A|2358
5MRE|1|A|U|2359
5MRE|1|A|U|2360
5MRE|1|A|A|2361
5MRE|1|A|U|2362
5MRE|1|A|A|2363

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 1

mL38

Chain R

bL27m

Chain b

mL59