HL_5MRE_070

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UAUA

Length

4 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_070 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1297

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

5MRE|1|aa|U|347
5MRE|1|aa|A|348
5MRE|1|aa|U|349
5MRE|1|aa|A|350

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 22

mS41

Chain I

uL14m

Chain M

bL19m