HL_5MRF_015

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

GGAUAAAC

Length

8 nucleotides

Bulged bases

5MRF|1|A|A|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRF_015 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1106

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

5MRF|1|A|G|612
5MRF|1|A|G|613
5MRF|1|A|A|614
5MRF|1|A|U|615
5MRF|1|A|A|616
5MRF|1|A|A|617
5MRF|1|A|A|618
5MRF|1|A|C|619

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

uL2m

Chain OO

uS15m