HL_5MRF_017

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

UGAAAGA

Length

7 nucleotides

Bulged bases

5MRF|1|A|A|672, 5MRF|1|A|G|675

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRF_017 not in the Motif Atlas

Homologous match to HL_5J7L_156

Geometric discrepancy: 0.1166

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

5MRF|1|A|U|670
5MRF|1|A|G|671
5MRF|1|A|A|672
5MRF|1|A|A|673
5MRF|1|A|A|674
5MRF|1|A|G|675
5MRF|1|A|A|676

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

uL2m