HL_5MRF_056

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRF_056 not in the Motif Atlas

Geometric match to HL_4V9F_066

Geometric discrepancy: 0.0766

The information below is about HL_4V9F_066

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

5MRF|1|A|C|2925
5MRF|1|A|G|2926
5MRF|1|A|C|2927
5MRF|1|A|A|2928
5MRF|1|A|A|2929
5MRF|1|A|G|2930

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain F

uL6m