HL_5MRF_088

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

AUUU

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRF_088 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3394

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

5MRF|1|aa|A|1198
5MRF|1|aa|U|1199
5MRF|1|aa|U|1203
5MRF|1|aa|U|1204

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain AA

bS1m

Chain II

uS9m

Chain TT

bS21m

Chain UU

mS23

Chain ZZ

mS37